Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.23□□□□□ -0.29
Pif1Q80SX8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
Pif1Q80SX8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.22□□□□□ -0.29
Pif1Q80SX8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Gm14042-201ENSMUST00000120139 833 ntBASIC13.22□□□□□ -0.29
Pif1Q80SX8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Gm6180-201ENSMUST00000065243 498 ntBASIC13.22□□□□□ -0.29
Pif1Q80SX8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pif1Q80SX8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm9726-201ENSMUST00000180321 678 ntBASIC13.21□□□□□ -0.29
Pif1Q80SX8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm43433-201ENSMUST00000196573 481 ntBASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm18018-201ENSMUST00000198273 408 ntBASIC13.21□□□□□ -0.29
Pif1Q80SX8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pif1Q80SX8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.21□□□□□ -0.29
Pif1Q80SX8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pif1Q80SX8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.21□□□□□ -0.3
Pif1Q80SX8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms