Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc2Q6PDG5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Gm9824-201ENSMUST00000178707 561 ntBASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Mir6956-201ENSMUST00000183598 62 ntBASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc2Q6PDG5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm5779-201ENSMUST00000218467 910 ntBASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms