Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Gm45453-201ENSMUST00000211758 853 ntBASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pdzrn3Q69ZS0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Gm9522-201ENSMUST00000182394 926 ntBASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Gm9229-201ENSMUST00000222777 126 ntBASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Gm15823-201ENSMUST00000064305 670 ntBASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pdzrn3Q69ZS0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pdzrn3Q69ZS0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm45668-201ENSMUST00000211271 493 ntBASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdzrn3Q69ZS0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms