Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Gm45841-201ENSMUST00000207700 164 ntBASIC15.73■□□□□ 0.11
Ecm1Q61508 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.72■□□□□ 0.11
Ecm1Q61508 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm8652-201ENSMUST00000181363 964 ntBASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm27772-201ENSMUST00000184900 187 ntBASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.72■□□□□ 0.11
Ecm1Q61508 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ecm1Q61508 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ecm1Q61508 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Efs-202ENSMUST00000227037 2540 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Gm13689-201ENSMUST00000119360 685 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Mir6420-201ENSMUST00000185032 102 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Gm45784-201ENSMUST00000188360 142 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Gm7561-201ENSMUST00000211203 886 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ecm1Q61508 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.71■□□□□ 0.11
Ecm1Q61508 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ecm1Q61508 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms