Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm16061-201ENSMUST00000122167 857 ntBASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm26039-201ENSMUST00000158152 144 ntBASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Odf3b-204ENSMUST00000227834 930 ntBASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1brtQ3UNC9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm8825-201ENSMUST00000182565 998 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm4518-201ENSMUST00000182638 718 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm19164-201ENSMUST00000210667 640 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm20049-201ENSMUST00000219950 730 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm10602-201ENSMUST00000098239 609 ntBASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1brtQ3UNC9 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm5643-201ENSMUST00000117081 966 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms