Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm8194-201ENSMUST00000159783 859 ntBASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Spg11Q3UHA3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Gm23200-201ENSMUST00000104379 132 ntBASIC13.02□□□□□ -0.32
Spg11Q3UHA3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.02□□□□□ -0.32
Spg11Q3UHA3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Spg11Q3UHA3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spg11Q3UHA3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms