Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm27525-201ENSMUST00000184465 107 ntBASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brf2Q3UAW9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Rprl2-201ENSMUST00000157150 290 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm43514-201ENSMUST00000198852 424 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brf2Q3UAW9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.47□□□□□ -0.25
Brf2Q3UAW9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms