Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ptchd3Q0EEE2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ptchd3Q0EEE2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ptchd3Q0EEE2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ptchd3Q0EEE2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm18733-201ENSMUST00000173950 856 ntBASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ptchd3Q0EEE2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ptchd3Q0EEE2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms