Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col6a2Q02788 Gm14042-201ENSMUST00000120139 833 ntBASIC14.28□□□□□ -0.12
Col6a2Q02788 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.28□□□□□ -0.12
Col6a2Q02788 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.28□□□□□ -0.12
Col6a2Q02788 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 AA619741-201ENSMUST00000195095 646 ntBASIC14.28□□□□□ -0.12
Col6a2Q02788 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.28□□□□□ -0.12
Col6a2Q02788 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col6a2Q02788 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a2Q02788 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col6a2Q02788 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Col6a2Q02788 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Col6a2Q02788 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a2Q02788 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col6a2Q02788 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Gm43703-201ENSMUST00000200523 763 ntBASIC14.27□□□□□ -0.13
Col6a2Q02788 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.27□□□□□ -0.13
Col6a2Q02788 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.27□□□□□ -0.13
Col6a2Q02788 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.27□□□□□ -0.13
Col6a2Q02788 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col6a2Q02788 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Col6a2Q02788 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a2Q02788 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 BC001981-202ENSMUST00000191393 1545 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm14719-201ENSMUST00000121891 340 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm16215-201ENSMUST00000161990 637 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm5866-201ENSMUST00000177881 973 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm6916-202ENSMUST00000205523 195 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm2423-201ENSMUST00000074863 733 ntBASIC14.26□□□□□ -0.13
Col6a2Q02788 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a2Q02788 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a2Q02788 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms