Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm18622-201ENSMUST00000219361 595 ntBASIC14.17□□□□□ -0.14
Crnkl1P63154 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Crnkl1P63154 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.17□□□□□ -0.14
Crnkl1P63154 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crnkl1P63154 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.16□□□□□ -0.14
Crnkl1P63154 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.16□□□□□ -0.14
Crnkl1P63154 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.16□□□□□ -0.14
Crnkl1P63154 Grk6-205ENSMUST00000224653 2976 ntBASIC14.16□□□□□ -0.14
Crnkl1P63154 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.16□□□□□ -0.14
Crnkl1P63154 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Crnkl1P63154 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crnkl1P63154 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Gm13418-201ENSMUST00000119097 944 ntBASIC14.15□□□□□ -0.14
Crnkl1P63154 Gm7862-201ENSMUST00000121461 292 ntBASIC14.15□□□□□ -0.14
Crnkl1P63154 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Crnkl1P63154 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.15□□□□□ -0.14
Crnkl1P63154 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.15□□□□□ -0.14
Crnkl1P63154 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crnkl1P63154 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Crnkl1P63154 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crnkl1P63154 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.14□□□□□ -0.15
Crnkl1P63154 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crnkl1P63154 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.14□□□□□ -0.15
Crnkl1P63154 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.14□□□□□ -0.15
Crnkl1P63154 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Crnkl1P63154 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crnkl1P63154 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crnkl1P63154 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms