Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RoraP51448 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RoraP51448 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.55□□□□□ -0.24
RoraP51448 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.54□□□□□ -0.24
RoraP51448 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.54□□□□□ -0.24
RoraP51448 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RoraP51448 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.54□□□□□ -0.24
RoraP51448 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RoraP51448 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.54□□□□□ -0.24
RoraP51448 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.54□□□□□ -0.24
RoraP51448 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RoraP51448 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.54□□□□□ -0.24
RoraP51448 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RoraP51448 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.54□□□□□ -0.24
RoraP51448 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RoraP51448 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.53□□□□□ -0.24
RoraP51448 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RoraP51448 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.53□□□□□ -0.24
RoraP51448 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.53□□□□□ -0.24
RoraP51448 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.53□□□□□ -0.24
RoraP51448 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.53□□□□□ -0.24
RoraP51448 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.53□□□□□ -0.24
RoraP51448 Gm7730-201ENSMUST00000212486 454 ntBASIC13.53□□□□□ -0.24
RoraP51448 Gm46209-201ENSMUST00000217912 553 ntBASIC13.53□□□□□ -0.24
RoraP51448 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RoraP51448 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
RoraP51448 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.53□□□□□ -0.24
RoraP51448 Syt7-204ENSMUST00000223586 1344 ntBASIC13.53□□□□□ -0.24
RoraP51448 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RoraP51448 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.53□□□□□ -0.24
RoraP51448 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RoraP51448 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RoraP51448 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RoraP51448 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RoraP51448 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RoraP51448 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
RoraP51448 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RoraP51448 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RoraP51448 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RoraP51448 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.52□□□□□ -0.25
RoraP51448 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Gm43703-201ENSMUST00000200523 763 ntBASIC13.52□□□□□ -0.25
RoraP51448 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.52□□□□□ -0.25
RoraP51448 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RoraP51448 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RoraP51448 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms