Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prox1P48437 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Prox1P48437 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.76□□□□□ -0.21
Prox1P48437 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prox1P48437 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prox1P48437 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prox1P48437 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.75□□□□□ -0.21
Prox1P48437 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Gm13884-201ENSMUST00000118103 829 ntBASIC13.75□□□□□ -0.21
Prox1P48437 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prox1P48437 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.75□□□□□ -0.21
Prox1P48437 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Prox1P48437 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prox1P48437 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.74□□□□□ -0.21
Prox1P48437 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.74□□□□□ -0.21
Prox1P48437 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.74□□□□□ -0.21
Prox1P48437 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Prox1P48437 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Prox1P48437 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Prox1P48437 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prox1P48437 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prox1P48437 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Prox1P48437 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.73□□□□□ -0.21
Prox1P48437 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Prox1P48437 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Prox1P48437 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Gm5682-201ENSMUST00000173402 505 ntBASIC13.73□□□□□ -0.21
Prox1P48437 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.73□□□□□ -0.21
Prox1P48437 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Prox1P48437 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prox1P48437 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms