Protein–RNA interactions for Protein: P43276

Hist1h1b, Histone H1.5, mousemouse

Known RBP Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1bP43276 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm15173-201ENSMUST00000122049 433 ntBASIC11.82□□□□□ -0.52
Hist1h1bP43276 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm27459-201ENSMUST00000184860 107 ntBASIC11.82□□□□□ -0.52
Hist1h1bP43276 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.82□□□□□ -0.52
Hist1h1bP43276 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h1bP43276 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.82□□□□□ -0.52
Hist1h1bP43276 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Rubie-203ENSMUST00000227803 2430 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm5682-201ENSMUST00000173402 505 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm6550-201ENSMUST00000187574 993 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm7977-201ENSMUST00000193787 748 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.81□□□□□ -0.52
Hist1h1bP43276 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1bP43276 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.8□□□□□ -0.52
Hist1h1bP43276 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.8□□□□□ -0.52
Hist1h1bP43276 Gm21362-201ENSMUST00000194272 928 ntBASIC11.8□□□□□ -0.52
Hist1h1bP43276 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1bP43276 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms