Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.46□□□□□ -0.25
Sox6P40645 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sox6P40645 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox6P40645 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.45□□□□□ -0.26
Sox6P40645 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox6P40645 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox6P40645 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.45□□□□□ -0.26
Sox6P40645 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.45□□□□□ -0.26
Sox6P40645 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox6P40645 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox6P40645 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox6P40645 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Sox6P40645 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox6P40645 Gm15467-201ENSMUST00000120582 445 ntBASIC13.44□□□□□ -0.26
Sox6P40645 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sox6P40645 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox6P40645 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Gm8000-201ENSMUST00000188378 592 ntBASIC13.44□□□□□ -0.26
Sox6P40645 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.44□□□□□ -0.26
Sox6P40645 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.44□□□□□ -0.26
Sox6P40645 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox6P40645 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox6P40645 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.44□□□□□ -0.26
Sox6P40645 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.43□□□□□ -0.26
Sox6P40645 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms