Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.32□□□□□ -0.44
Slc6a1P31648 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.32□□□□□ -0.44
Slc6a1P31648 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm7862-201ENSMUST00000121461 292 ntBASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm25745-201ENSMUST00000174945 133 ntBASIC12.32□□□□□ -0.44
Slc6a1P31648 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Slc6a1P31648 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm11452-201ENSMUST00000122376 690 ntBASIC12.31□□□□□ -0.44
Slc6a1P31648 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm25925-201ENSMUST00000158314 306 ntBASIC12.31□□□□□ -0.44
Slc6a1P31648 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.31□□□□□ -0.44
Slc6a1P31648 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.31□□□□□ -0.44
Slc6a1P31648 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.31□□□□□ -0.44
Slc6a1P31648 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a1P31648 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a1P31648 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Slc6a1P31648 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Gm4535-201ENSMUST00000182274 558 ntBASIC12.3□□□□□ -0.44
Slc6a1P31648 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms