Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.62□□□□□ -0.39
Cd28P31041 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.62□□□□□ -0.39
Cd28P31041 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cd28P31041 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Cd28P31041 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd28P31041 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.62□□□□□ -0.39
Cd28P31041 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd28P31041 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cd28P31041 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Cd28P31041 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd28P31041 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd28P31041 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cd28P31041 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.61□□□□□ -0.39
Cd28P31041 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd28P31041 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd28P31041 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.61□□□□□ -0.39
Cd28P31041 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd28P31041 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.6□□□□□ -0.39
Cd28P31041 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Gm5682-201ENSMUST00000173402 505 ntBASIC12.6□□□□□ -0.39
Cd28P31041 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Gm18246-201ENSMUST00000221023 728 ntBASIC12.6□□□□□ -0.39
Cd28P31041 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cd28P31041 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms