Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm12859-201ENSMUST00000117834 427 ntBASIC21.21■□□□□ 0.99
NclP09405 Gm11424-201ENSMUST00000121929 829 ntBASIC21.21■□□□□ 0.99
NclP09405 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC21.21■□□□□ 0.99
NclP09405 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC21.21■□□□□ 0.99
NclP09405 Ighv1-25-201ENSMUST00000195638 345 ntBASIC21.21■□□□□ 0.99
NclP09405 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NclP09405 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclP09405 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NclP09405 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NclP09405 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC21.2■□□□□ 0.98
NclP09405 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC21.2■□□□□ 0.98
NclP09405 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NclP09405 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC21.2■□□□□ 0.98
NclP09405 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Gm45667-201ENSMUST00000210380 1316 ntBASIC21.2■□□□□ 0.98
NclP09405 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclP09405 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NclP09405 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NclP09405 Gm12585-201ENSMUST00000117307 290 ntBASIC21.19■□□□□ 0.98
NclP09405 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NclP09405 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
NclP09405 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NclP09405 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NclP09405 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
NclP09405 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
NclP09405 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC21.18■□□□□ 0.98
NclP09405 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Gm22189-201ENSMUST00000103822 86 ntBASIC21.18■□□□□ 0.98
NclP09405 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.18■□□□□ 0.98
NclP09405 Gm15460-201ENSMUST00000118147 391 ntBASIC21.18■□□□□ 0.98
NclP09405 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC21.18■□□□□ 0.98
NclP09405 Gm15393-201ENSMUST00000120499 219 ntBASIC21.18■□□□□ 0.98
NclP09405 Gm6473-201ENSMUST00000188572 1210 ntBASIC21.18■□□□□ 0.98
NclP09405 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.18■□□□□ 0.98
NclP09405 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NclP09405 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
NclP09405 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclP09405 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Gm15957-201ENSMUST00000118893 974 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms