Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClppO88696 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14□□□□□ -0.17
ClppO88696 Gm42706-201ENSMUST00000199733 1910 ntBASIC14□□□□□ -0.17
ClppO88696 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14□□□□□ -0.17
ClppO88696 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14□□□□□ -0.17
ClppO88696 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14□□□□□ -0.17
ClppO88696 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14□□□□□ -0.17
ClppO88696 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14□□□□□ -0.17
ClppO88696 Gm15483-201ENSMUST00000120338 456 ntBASIC14□□□□□ -0.17
ClppO88696 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14□□□□□ -0.17
ClppO88696 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Gm14780-201ENSMUST00000118387 2737 ntBASIC14□□□□□ -0.17
ClppO88696 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ClppO88696 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClppO88696 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14□□□□□ -0.17
ClppO88696 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14□□□□□ -0.17
ClppO88696 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClppO88696 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.99□□□□□ -0.17
ClppO88696 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.99□□□□□ -0.17
ClppO88696 Gm13453-201ENSMUST00000118708 357 ntBASIC13.99□□□□□ -0.17
ClppO88696 Gm27321-201ENSMUST00000185021 205 ntBASIC13.99□□□□□ -0.17
ClppO88696 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ClppO88696 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.99□□□□□ -0.17
ClppO88696 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ClppO88696 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ClppO88696 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
ClppO88696 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClppO88696 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ClppO88696 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.98□□□□□ -0.17
ClppO88696 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.98□□□□□ -0.17
ClppO88696 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.98□□□□□ -0.17
ClppO88696 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.98□□□□□ -0.17
ClppO88696 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.98□□□□□ -0.17
ClppO88696 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms