Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Gm45630-201ENSMUST00000210243 1911 ntBASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Ccdc180J3QNE4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Gm4271-201ENSMUST00000174444 973 ntBASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc180J3QNE4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc180J3QNE4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Gm15371-201ENSMUST00000117057 784 ntBASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Gm10156-201ENSMUST00000122364 462 ntBASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Gm3809-201ENSMUST00000180973 1006 ntBASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Gm45504-201ENSMUST00000211407 2107 ntBASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc180J3QNE4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Ankra2-208ENSMUST00000226100 1476 ntBASIC25.64■■□□□ 1.69
Ccdc180J3QNE4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Gm22018-201ENSMUST00000104357 131 ntBASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC25.63■■□□□ 1.69
Ccdc180J3QNE4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc180J3QNE4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms