Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3tc1G3X9F6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Gm12742-201ENSMUST00000117326 410 ntBASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3tc1G3X9F6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm43094-201ENSMUST00000196549 921 ntBASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3tc1G3X9F6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Gm15376-201ENSMUST00000122258 783 ntBASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.19■□□□□ 0.34
Sh3tc1G3X9F6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Gm12957-201ENSMUST00000117835 377 ntBASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Gm13226-201ENSMUST00000117838 404 ntBASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3tc1G3X9F6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms