Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chrna9G3X8Z7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chrna9G3X8Z7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Rprl2-201ENSMUST00000157150 290 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Gm38225-201ENSMUST00000194001 393 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chrna9G3X8Z7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Gm18889-201ENSMUST00000174284 929 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Gm44608-201ENSMUST00000206827 855 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna9G3X8Z7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna9G3X8Z7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Gm27494-201ENSMUST00000184735 189 ntBASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Gm29541-201ENSMUST00000191351 678 ntBASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna9G3X8Z7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna9G3X8Z7 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.32■□□□□ 0.04
Chrna9G3X8Z7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms