Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Celf4-206ENSMUST00000224553 1729 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.01□□□□□ -0.65
PdfS4R2K0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdfS4R2K0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
PdfS4R2K0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11□□□□□ -0.65
PdfS4R2K0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11□□□□□ -0.65
PdfS4R2K0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11□□□□□ -0.65
PdfS4R2K0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11□□□□□ -0.65
PdfS4R2K0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PdfS4R2K0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PdfS4R2K0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PdfS4R2K0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gm7862-201ENSMUST00000121461 292 ntBASIC10.99□□□□□ -0.65
PdfS4R2K0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.99□□□□□ -0.65
PdfS4R2K0 Gm4535-201ENSMUST00000182274 558 ntBASIC10.99□□□□□ -0.65
PdfS4R2K0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.99□□□□□ -0.65
PdfS4R2K0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.99□□□□□ -0.65
PdfS4R2K0 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.99□□□□□ -0.65
PdfS4R2K0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PdfS4R2K0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms