Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Gm12138-201ENSMUST00000122180 951 ntBASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Gm15957-201ENSMUST00000118893 974 ntBASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.03■□□□□ 0.32
Stag1Q9D3E6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stag1Q9D3E6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Gm18624-201ENSMUST00000220966 658 ntBASIC17.02■□□□□ 0.32
Stag1Q9D3E6 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.02■□□□□ 0.32
Stag1Q9D3E6 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stag1Q9D3E6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stag1Q9D3E6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gm45384-201ENSMUST00000210451 277 ntBASIC17.01■□□□□ 0.31
Stag1Q9D3E6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.01■□□□□ 0.31
Stag1Q9D3E6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms