Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Gm7787-201ENSMUST00000216858 688 ntBASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44357-201ENSMUST00000195897 142 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm19658-201ENSMUST00000196231 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44367-201ENSMUST00000196836 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44350-201ENSMUST00000197197 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44390-201ENSMUST00000197533 144 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm6089-201ENSMUST00000197666 938 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44313-201ENSMUST00000198018 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44486-201ENSMUST00000198508 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44314-201ENSMUST00000199263 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44394-201ENSMUST00000199558 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44484-201ENSMUST00000199873 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44466-201ENSMUST00000200264 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm44359-201ENSMUST00000200671 138 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Gm18246-201ENSMUST00000221023 728 ntBASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chaf1bQ9D0N7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1bQ9D0N7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms