Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Gm28033-201ENSMUST00000184224 96 ntBASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Matn2-206ENSMUST00000228570 2798 ntBASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt88Q9CPR6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.93□□□□□ -0.34
Krt88Q9CPR6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Gm18669-201ENSMUST00000216049 778 ntBASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt88Q9CPR6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gm27741-201ENSMUST00000185060 237 ntBASIC12.92□□□□□ -0.34
Krt88Q9CPR6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms