Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gm13597-201ENSMUST00000121239 375 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim8Q99PJ2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim8Q99PJ2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm2651-201ENSMUST00000203560 838 ntBASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim8Q99PJ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms