Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh15Q99PJ1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm16379-201ENSMUST00000161469 348 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm8762-201ENSMUST00000193486 339 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm3890-201ENSMUST00000182416 207 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm21769-201ENSMUST00000211922 111 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm10608-202ENSMUST00000213924 676 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm26315-201ENSMUST00000083890 321 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.86■□□□□ 0.13
Pcdh15Q99PJ1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh15Q99PJ1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms