Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm15678-201ENSMUST00000117573 960 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm27892-201ENSMUST00000185017 106 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 Mir7654-201ENSMUST00000185082 70 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm5279-201ENSMUST00000199575 745 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.46■□□□□ 0.23
Rfc4Q99J62 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfc4Q99J62 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.46■□□□□ 0.22
Rfc4Q99J62 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm21470-201ENSMUST00000187680 696 ntBASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.45■□□□□ 0.22
Rfc4Q99J62 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfc4Q99J62 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.44■□□□□ 0.22
Rfc4Q99J62 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms