Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm24543-201ENSMUST00000103867 82 ntBASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm28630-201ENSMUST00000187806 498 ntBASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb2Q91Y00 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Gm27618-201ENSMUST00000183671 60 ntBASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb2Q91Y00 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm13453-201ENSMUST00000118708 357 ntBASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm10275-202ENSMUST00000168697 495 ntBASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Auts2-212ENSMUST00000178555 309 ntBASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm6888-201ENSMUST00000221983 706 ntBASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Gm10275-201ENSMUST00000092620 635 ntBASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb2Q91Y00 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb2Q91Y00 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb2Q91Y00 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Pcdhb2Q91Y00 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb2Q91Y00 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms