Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm29310-201ENSMUST00000185468 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21825-201ENSMUST00000185728 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm29109-201ENSMUST00000185895 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21896-201ENSMUST00000186520 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21873-201ENSMUST00000186728 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21794-201ENSMUST00000187056 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21880-201ENSMUST00000187275 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21826-201ENSMUST00000187451 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21198-201ENSMUST00000188393 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21749-201ENSMUST00000189343 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21901-201ENSMUST00000189568 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm29424-201ENSMUST00000189716 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm28599-201ENSMUST00000189838 694 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21867-201ENSMUST00000189917 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm29269-201ENSMUST00000190087 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21722-201ENSMUST00000190153 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm28423-201ENSMUST00000190701 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21899-201ENSMUST00000190745 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21910-201ENSMUST00000191163 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21849-201ENSMUST00000191571 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm28678-201ENSMUST00000191593 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm20910-201ENSMUST00000193268 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm21871-201ENSMUST00000194621 696 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm2756-201ENSMUST00000195851 400 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.15■□□□□ 0.34
Top1mtQ8R4U6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Top1mtQ8R4U6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.14■□□□□ 0.34
Top1mtQ8R4U6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Gm25287-201ENSMUST00000103846 110 ntBASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Gm22918-201ENSMUST00000103855 110 ntBASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Gm43474-201ENSMUST00000196415 774 ntBASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Top1mtQ8R4U6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Chchd1-203ENSMUST00000224633 557 ntBASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms