Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Uba3Q8C878 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Uba3Q8C878 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Uba3Q8C878 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Uba3Q8C878 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gm22175-201ENSMUST00000175007 78 ntBASIC15.11■□□□□ 0.01
Uba3Q8C878 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.11■□□□□ 0.01
Uba3Q8C878 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Uba3Q8C878 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.11■□□□□ 0.01
Uba3Q8C878 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
Uba3Q8C878 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Uba3Q8C878 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.1■□□□□ 0.01
Uba3Q8C878 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Gm8410-201ENSMUST00000117225 605 ntBASIC15.1■□□□□ 0.01
Uba3Q8C878 Gm6222-201ENSMUST00000120787 396 ntBASIC15.1■□□□□ 0.01
Uba3Q8C878 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.1■□□□□ 0.01
Uba3Q8C878 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.1■□□□□ 0.01
Uba3Q8C878 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.1■□□□□ 0.01
Uba3Q8C878 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Uba3Q8C878 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Gm15693-201ENSMUST00000120470 637 ntBASIC15.09■□□□□ 0.01
Uba3Q8C878 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Gm38294-201ENSMUST00000192831 381 ntBASIC15.09■□□□□ 0.01
Uba3Q8C878 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.09■□□□□ 0.01
Uba3Q8C878 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Uba3Q8C878 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Uba3Q8C878 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Uba3Q8C878 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Uba3Q8C878 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Uba3Q8C878 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Uba3Q8C878 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.08■□□□□ 0
Uba3Q8C878 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Uba3Q8C878 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.08■□□□□ 0
Uba3Q8C878 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms