Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Gm11779-201ENSMUST00000118541 368 ntBASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Gm15467-201ENSMUST00000120582 445 ntBASIC12.82□□□□□ -0.36
Rft1Q8C3B8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.82□□□□□ -0.36
Rft1Q8C3B8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rft1Q8C3B8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.81□□□□□ -0.36
Rft1Q8C3B8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Gm27300-201ENSMUST00000184085 97 ntBASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Gm27335-201ENSMUST00000184758 97 ntBASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Gm5264-201ENSMUST00000190584 848 ntBASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Rft1Q8C3B8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Carlr-201ENSMUST00000181515 2574 ntBASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.8□□□□□ -0.36
Rft1Q8C3B8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms