Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcal1Q8BJL0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gm15824-201ENSMUST00000119516 955 ntBASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Mir7654-201ENSMUST00000185082 70 ntBASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gm44719-201ENSMUST00000206404 149 ntBASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcal1Q8BJL0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcal1Q8BJL0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcal1Q8BJL0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcal1Q8BJL0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms