Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.82□□□□□ -0.04
Trim62Q80V85 Gm27618-201ENSMUST00000183671 60 ntBASIC14.82□□□□□ -0.04
Trim62Q80V85 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.82□□□□□ -0.04
Trim62Q80V85 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.82□□□□□ -0.04
Trim62Q80V85 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim62Q80V85 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Trim62Q80V85 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim62Q80V85 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim62Q80V85 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.81□□□□□ -0.04
Trim62Q80V85 Gm17837-201ENSMUST00000186435 985 ntBASIC14.81□□□□□ -0.04
Trim62Q80V85 Gm44344-201ENSMUST00000200287 129 ntBASIC14.81□□□□□ -0.04
Trim62Q80V85 Gm6888-201ENSMUST00000221983 706 ntBASIC14.81□□□□□ -0.04
Trim62Q80V85 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.81□□□□□ -0.04
Trim62Q80V85 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim62Q80V85 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trim62Q80V85 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim62Q80V85 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim62Q80V85 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim62Q80V85 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Shd-206ENSMUST00000225145 998 ntBASIC14.8□□□□□ -0.04
Trim62Q80V85 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.8□□□□□ -0.04
Trim62Q80V85 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim62Q80V85 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim62Q80V85 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim62Q80V85 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms