Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Exosc3Q7TQK4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 AA619741-201ENSMUST00000195095 646 ntBASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Gm45453-201ENSMUST00000211758 853 ntBASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Exosc3Q7TQK4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm8410-201ENSMUST00000117225 605 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm13616-201ENSMUST00000120600 222 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm27631-201ENSMUST00000184163 466 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Exosc3Q7TQK4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Exosc3Q7TQK4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms