Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Gm24526-201ENSMUST00000082921 158 ntBASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Gm6091-201ENSMUST00000098307 165 ntBASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Gm8652-201ENSMUST00000181363 964 ntBASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Gm33320-201ENSMUST00000192232 530 ntBASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc85bQ6PDY0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Gm15236-201ENSMUST00000117309 379 ntBASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Gm7561-201ENSMUST00000211203 886 ntBASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc85bQ6PDY0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc85bQ6PDY0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms