Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf220Q6PDX6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm15372-201ENSMUST00000120729 834 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm25745-201ENSMUST00000174945 133 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm18041-201ENSMUST00000218210 618 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf220Q6PDX6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm27357-201ENSMUST00000183754 135 ntBASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm27704-201ENSMUST00000185094 107 ntBASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm18622-201ENSMUST00000219361 595 ntBASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf220Q6PDX6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Rnf220Q6PDX6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf220Q6PDX6 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.58□□□□□ -0.23
Rnf220Q6PDX6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms