Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm5687-201ENSMUST00000118252 640 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm15808-201ENSMUST00000119046 604 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm9124-201ENSMUST00000191789 1092 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm9113-201ENSMUST00000192510 1018 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm5069-202ENSMUST00000192714 1011 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm9131-201ENSMUST00000193557 1089 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm9121-201ENSMUST00000193749 1071 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm38341-201ENSMUST00000195357 515 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Gm37466-201ENSMUST00000195692 652 ntBASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slx4Q6P1D7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Gm1335-201ENSMUST00000121653 386 ntBASIC21.69■■□□□ 1.06
Slx4Q6P1D7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Olfr284-202ENSMUST00000206647 966 ntBASIC21.69■■□□□ 1.06
Slx4Q6P1D7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slx4Q6P1D7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Gm13342-201ENSMUST00000121055 207 ntBASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 AC140406.1-201ENSMUST00000226481 465 ntBASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Gm5620-201ENSMUST00000077991 1348 ntBASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slx4Q6P1D7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Gm12846-201ENSMUST00000120431 1373 ntBASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Mir7070-201ENSMUST00000183657 86 ntBASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Gm45630-201ENSMUST00000210243 1911 ntBASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slx4Q6P1D7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm7029-201ENSMUST00000173226 450 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm5850-201ENSMUST00000192923 1206 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms