Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.61■□□□□ 0.41
Trim27Q62158 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim27Q62158 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim27Q62158 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim27Q62158 Gm15957-201ENSMUST00000118893 974 ntBASIC17.6■□□□□ 0.41
Trim27Q62158 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim27Q62158 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Trim27Q62158 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Gm5312-201ENSMUST00000203728 547 ntBASIC17.6■□□□□ 0.41
Trim27Q62158 Gm45453-201ENSMUST00000211758 853 ntBASIC17.6■□□□□ 0.41
Trim27Q62158 Gm5779-201ENSMUST00000218467 910 ntBASIC17.6■□□□□ 0.41
Trim27Q62158 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Trim27Q62158 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim27Q62158 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim27Q62158 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim27Q62158 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trim27Q62158 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Trim27Q62158 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Gm8396-201ENSMUST00000057361 823 ntBASIC17.59■□□□□ 0.41
Trim27Q62158 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim27Q62158 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim27Q62158 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim27Q62158 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim27Q62158 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trim27Q62158 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim27Q62158 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim27Q62158 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim27Q62158 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Trim27Q62158 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Gm5566-201ENSMUST00000116118 459 ntBASIC17.58■□□□□ 0.4
Trim27Q62158 Gm12428-201ENSMUST00000119844 727 ntBASIC17.58■□□□□ 0.4
Trim27Q62158 Gm9719-201ENSMUST00000162765 543 ntBASIC17.58■□□□□ 0.4
Trim27Q62158 Gm24158-201ENSMUST00000175263 71 ntBASIC17.58■□□□□ 0.4
Trim27Q62158 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.58■□□□□ 0.4
Trim27Q62158 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim27Q62158 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trim27Q62158 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Mir449b-201ENSMUST00000104833 80 ntBASIC17.57■□□□□ 0.4
Trim27Q62158 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim27Q62158 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim27Q62158 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim27Q62158 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim27Q62158 Gm10253-201ENSMUST00000194270 940 ntBASIC17.57■□□□□ 0.4
Trim27Q62158 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms