Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ctr9Q62018 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ctr9Q62018 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.9■□□□□ 0.3
Ctr9Q62018 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 AA619741-201ENSMUST00000195095 646 ntBASIC16.9■□□□□ 0.3
Ctr9Q62018 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.9■□□□□ 0.3
Ctr9Q62018 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.9■□□□□ 0.3
Ctr9Q62018 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.9■□□□□ 0.3
Ctr9Q62018 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ctr9Q62018 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctr9Q62018 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Ctr9Q62018 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ctr9Q62018 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ctr9Q62018 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ctr9Q62018 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.89■□□□□ 0.29
Ctr9Q62018 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Ctr9Q62018 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.89■□□□□ 0.29
Ctr9Q62018 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.89■□□□□ 0.29
Ctr9Q62018 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.89■□□□□ 0.29
Ctr9Q62018 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctr9Q62018 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ctr9Q62018 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.88■□□□□ 0.29
Ctr9Q62018 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.88■□□□□ 0.29
Ctr9Q62018 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.88■□□□□ 0.29
Ctr9Q62018 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.88■□□□□ 0.29
Ctr9Q62018 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ctr9Q62018 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ctr9Q62018 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.87■□□□□ 0.29
Ctr9Q62018 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.86■□□□□ 0.29
Ctr9Q62018 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.86■□□□□ 0.29
Ctr9Q62018 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms