Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Gm9182-201ENSMUST00000217829 639 ntBASIC12.66□□□□□ -0.38
Cd55bQ61476 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.66□□□□□ -0.38
Cd55bQ61476 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cd55bQ61476 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cd55bQ61476 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.66□□□□□ -0.38
Cd55bQ61476 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd55bQ61476 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.66□□□□□ -0.38
Cd55bQ61476 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd55bQ61476 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd55bQ61476 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Carlr-201ENSMUST00000181515 2574 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd55bQ61476 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.65□□□□□ -0.38
Cd55bQ61476 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.65□□□□□ -0.38
Cd55bQ61476 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd55bQ61476 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd55bQ61476 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cd55bQ61476 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd55bQ61476 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd55bQ61476 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cd55bQ61476 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.64□□□□□ -0.39
Cd55bQ61476 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Gm13015-201ENSMUST00000118674 204 ntBASIC12.64□□□□□ -0.39
Cd55bQ61476 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Gm22175-201ENSMUST00000175007 78 ntBASIC12.64□□□□□ -0.39
Cd55bQ61476 Mir6956-201ENSMUST00000183598 62 ntBASIC12.64□□□□□ -0.39
Cd55bQ61476 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.64□□□□□ -0.39
Cd55bQ61476 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cd55bQ61476 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd55bQ61476 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms