Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.92□□□□□ -0.02
Smarcd1Q61466 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.92□□□□□ -0.02
Smarcd1Q61466 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm15487-201ENSMUST00000122373 465 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.91□□□□□ -0.02
Smarcd1Q61466 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd1Q61466 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm4875-201ENSMUST00000118257 786 ntBASIC14.9□□□□□ -0.02
Smarcd1Q61466 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm27838-201ENSMUST00000184829 128 ntBASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gm33320-201ENSMUST00000192232 530 ntBASIC14.9□□□□□ -0.02
Smarcd1Q61466 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.9□□□□□ -0.02
Smarcd1Q61466 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd1Q61466 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd1Q61466 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms