Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Gm15483-201ENSMUST00000120338 456 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Gm9726-201ENSMUST00000180321 678 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ClpbQ60649 Gm38225-201ENSMUST00000194001 393 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Gm10253-201ENSMUST00000194270 940 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Gm7774-201ENSMUST00000200064 533 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.77□□□□□ -0.21
ClpbQ60649 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.77□□□□□ -0.21
ClpbQ60649 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ClpbQ60649 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ClpbQ60649 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ClpbQ60649 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
ClpbQ60649 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ClpbQ60649 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ClpbQ60649 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
ClpbQ60649 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ClpbQ60649 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22065-201ENSMUST00000103753 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22066-201ENSMUST00000103761 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24932-201ENSMUST00000103763 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24115-201ENSMUST00000103799 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22190-201ENSMUST00000103827 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22191-201ENSMUST00000103831 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24721-201ENSMUST00000103849 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm28018-201ENSMUST00000103869 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm26399-201ENSMUST00000103937 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Gm13464-201ENSMUST00000119418 935 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm13616-201ENSMUST00000120600 222 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25349-201ENSMUST00000177728 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm23616-201ENSMUST00000177797 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25871-201ENSMUST00000177816 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24752-201ENSMUST00000178240 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24496-201ENSMUST00000178287 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25649-201ENSMUST00000178476 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25548-201ENSMUST00000178681 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm23147-201ENSMUST00000178841 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm26095-201ENSMUST00000179270 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22171-201ENSMUST00000179283 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm23936-201ENSMUST00000179354 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm22619-201ENSMUST00000179516 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25255-201ENSMUST00000179579 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24755-201ENSMUST00000179691 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm26506-201ENSMUST00000179692 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm25086-201ENSMUST00000179931 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm23243-201ENSMUST00000180047 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24659-201ENSMUST00000180212 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm24169-201ENSMUST00000180244 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm23689-201ENSMUST00000180354 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm27359-201ENSMUST00000184153 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm27785-201ENSMUST00000184268 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm27466-201ENSMUST00000184396 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm27703-201ENSMUST00000184836 110 ntBASIC13.76□□□□□ -0.21
ClpbQ60649 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.76□□□□□ -0.21
ClpbQ60649 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ClpbQ60649 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ClpbQ60649 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ClpbQ60649 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms