Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm11424-201ENSMUST00000121929 829 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Gm3436-201ENSMUST00000179930 840 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Syt7-205ENSMUST00000224135 1557 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Mir1897-201ENSMUST00000122581 272 ntBASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Gm43703-201ENSMUST00000200523 763 ntBASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Gm45453-201ENSMUST00000211758 853 ntBASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.25■□□□□ 0.03
Shroom1Q5SX79 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Gm29667-201ENSMUST00000190817 490 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Gm37230-201ENSMUST00000194491 818 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Gm46209-201ENSMUST00000217912 553 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom1Q5SX79 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms