Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm6222-202ENSMUST00000182143 629 ntBASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm10752-201ENSMUST00000218348 729 ntBASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Spg11Q3UHA3 Gm9083-201ENSMUST00000120423 819 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm44551-201ENSMUST00000208804 171 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Spg11Q3UHA3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Spg11Q3UHA3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms