Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.48□□□□□ -0.25
Mmp25Q3U435 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm15957-201ENSMUST00000118893 974 ntBASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm38294-201ENSMUST00000192831 381 ntBASIC13.48□□□□□ -0.25
Mmp25Q3U435 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Shd-206ENSMUST00000225145 998 ntBASIC13.48□□□□□ -0.25
Mmp25Q3U435 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.48□□□□□ -0.25
Mmp25Q3U435 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp25Q3U435 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.47□□□□□ -0.25
Mmp25Q3U435 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm13223-201ENSMUST00000118609 747 ntBASIC13.47□□□□□ -0.25
Mmp25Q3U435 Mir1897-201ENSMUST00000122581 272 ntBASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm27680-201ENSMUST00000184192 160 ntBASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm44344-201ENSMUST00000200287 129 ntBASIC13.47□□□□□ -0.25
Mmp25Q3U435 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp25Q3U435 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mmp25Q3U435 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms