Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Carlr-201ENSMUST00000181515 2574 ntBASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm26464-201ENSMUST00000157094 305 ntBASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chrna5Q2MKA5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Sybu-209ENSMUST00000228639 4113 ntBASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna5Q2MKA5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm13385-201ENSMUST00000121089 220 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm29649-201ENSMUST00000185649 419 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm10012-201ENSMUST00000078252 192 ntBASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna5Q2MKA5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.9■□□□□ 0.3
Chrna5Q2MKA5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms