Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm13342-201ENSMUST00000121055 207 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm1335-201ENSMUST00000121653 386 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm38266-201ENSMUST00000194931 421 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm43818-201ENSMUST00000200605 466 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.33□□□□□ -0.76
Hspg2Q05793 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.32□□□□□ -0.76
Hspg2Q05793 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.32□□□□□ -0.76
Hspg2Q05793 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm8927-201ENSMUST00000181978 981 ntBASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm38671-201ENSMUST00000200573 130 ntBASIC10.32□□□□□ -0.76
Hspg2Q05793 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm11803-201ENSMUST00000119966 444 ntBASIC10.32□□□□□ -0.76
Hspg2Q05793 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.32□□□□□ -0.76
Hspg2Q05793 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.32□□□□□ -0.76
Hspg2Q05793 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.32□□□□□ -0.76
Hspg2Q05793 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Hspg2Q05793 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hspg2Q05793 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm21470-201ENSMUST00000187680 696 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm8213-201ENSMUST00000118191 441 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.31□□□□□ -0.76
Hspg2Q05793 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm17376-201ENSMUST00000166016 84 ntBASIC10.31□□□□□ -0.76
Hspg2Q05793 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm16505-201ENSMUST00000179981 232 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms