Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.87■□□□□ 0.45
Vps33bP59016 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.87■□□□□ 0.45
Vps33bP59016 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33bP59016 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Vps33bP59016 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps33bP59016 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vps33bP59016 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Gm22323-201ENSMUST00000103832 109 ntBASIC17.86■□□□□ 0.45
Vps33bP59016 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps33bP59016 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.86■□□□□ 0.45
Vps33bP59016 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Gm37259-201ENSMUST00000193903 849 ntBASIC17.86■□□□□ 0.45
Vps33bP59016 Olfr284-202ENSMUST00000206647 966 ntBASIC17.86■□□□□ 0.45
Vps33bP59016 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Vps33bP59016 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps33bP59016 Gm10268-201ENSMUST00000085340 555 ntBASIC17.86■□□□□ 0.45
Vps33bP59016 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Vps33bP59016 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33bP59016 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vps33bP59016 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.85■□□□□ 0.45
Vps33bP59016 Gm45865-201ENSMUST00000211815 945 ntBASIC17.85■□□□□ 0.45
Vps33bP59016 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.85■□□□□ 0.45
Vps33bP59016 Cts7-204ENSMUST00000225321 1257 ntBASIC17.85■□□□□ 0.45
Vps33bP59016 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.85■□□□□ 0.45
Vps33bP59016 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vps33bP59016 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33bP59016 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.84■□□□□ 0.45
Vps33bP59016 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Vps33bP59016 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.84■□□□□ 0.45
Vps33bP59016 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.84■□□□□ 0.45
Vps33bP59016 Gm37497-201ENSMUST00000195830 798 ntBASIC17.84■□□□□ 0.45
Vps33bP59016 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vps33bP59016 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 BC037039-201ENSMUST00000192003 2205 ntBASIC17.84■□□□□ 0.45
Vps33bP59016 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps33bP59016 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33bP59016 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33bP59016 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Vps33bP59016 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.83■□□□□ 0.45
Vps33bP59016 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Gm12241-201ENSMUST00000118330 726 ntBASIC17.83■□□□□ 0.44
Vps33bP59016 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps33bP59016 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps33bP59016 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vps33bP59016 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms