Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Cdx2P43241 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdx2P43241 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdx2P43241 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.56□□□□□ -0.24
Cdx2P43241 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.56□□□□□ -0.24
Cdx2P43241 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdx2P43241 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdx2P43241 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.56□□□□□ -0.24
Cdx2P43241 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.56□□□□□ -0.24
Cdx2P43241 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx2P43241 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.55□□□□□ -0.24
Cdx2P43241 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdx2P43241 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdx2P43241 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx2P43241 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx2P43241 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdx2P43241 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Gm15240-201ENSMUST00000118156 720 ntBASIC13.54□□□□□ -0.24
Cdx2P43241 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdx2P43241 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.54□□□□□ -0.24
Cdx2P43241 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.54□□□□□ -0.24
Cdx2P43241 Gm18905-201ENSMUST00000205454 928 ntBASIC13.54□□□□□ -0.24
Cdx2P43241 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdx2P43241 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdx2P43241 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx2P43241 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms